Beast code in Giters

Remi-Andre Olsen's repositories

anglerfish

Anglerfish - Nanopore reads from Illumina libraries

Language:PythonMIT2 3 51

NBIS_HiC_curation_course_2022

MIT2 30

radQC

Pipeline for QC of RAD-seq data

Language:NextflowMIT2 3 1

merged_nodups2bed

Language:ShellMIT1 30

MultiQC

Aggregate results from bioinformatics analyses across many samples into a single report.

Language:PythonGPL-3.01 30

adaptive_sampler_check

Language:PythonMIT03 11

10x_ont_technote-2024

Language:Jupyter NotebookMIT010

3d-dna-docker

Language:DockerfileMIT030

bioconda-recipes

Conda recipes for the bioconda channel.

Language:ShellMIT020

docker-airsonic-advanced

Language:DockerfileGPL-3.0010

dovetail-hichip-singularity

Language:SingularityMIT030

fast5mod-singularity

Language:SingularityMIT030

flames-docker

Unofficial docker image for flames

Language:DockerfileMIT020

hicscaff

Language:NextflowMIT030

hpc-scripts

Language:ShellMIT03 1

juicer-cpu-docker

Language:DockerfileMIT030

mitoVGP

The Vertebrate Genomes Project Mitogenome Assembly Pipeline

Language:ShellNOASSERTION020

modules

Repository to host tool-specific module files for the Nextflow DSL2 community!

Language:NextflowMIT010

nf-core-neutronstar

Main fork is here: https://github.com/SciLifeLab/NGI-NeutronStar

Language:NextflowMIT03 1

NGI-AS-tech_note-2024

MIT020

NGI_dashboards

SciLifeLab NGI Dashboard Code

Language:HTMLMIT030

ngisweden.se

Wordpress theme and plugins for ngisweden.se

Language:PHPMIT020

pairsam2mnd

Language:PythonMIT000

pin_hic_singularity

Language:SingularityMIT000

pod5-docker

Language:DockerfileMIT020

remiolsen-yahs

Language:DockerfileMIT020

singularity-in-docker

A small repository with instructions on how to build Singularity images inside a Docker container.

Language:DockerfileNOASSERTION020

status

Language:JavaScriptMIT030

strobealign-docker

Code dump

Language:DockerfileMIT020

wf-single-cell

Language:PythonNOASSERTION010