realfastvla / rfpipe

Fast radio interferometric transient search pipeline

Home Page:https://realfastvla.github.io/rfpipe

Geek Repo:Geek Repo

Github PK Tool:Github PK Tool

Error with empty Flag file on minisdm

KshitijAggarwal opened this issue · comments

Error when running search on a minisdm with applyonlineflags = True and an empty Flag.xml file.

Screen Shot 2019-05-09 at 2 04 52 PM

I don't think this is related to an empty Flag.xml file, since I cannot reproduce it with another SDM like this.
Can you reproduce it and tell me which SDM you used?

Here is the SDM I used:
realfast_19A-393_TEST_B2319_000.58602.86878855324_1556572173889

It is in the staging area as well.

I used the following prefs:

prefs={'gainfile': gainfile, 'saveplots': False, 'savenoise': False, 'savesols': False,
'savecandcollection': True, 'savecanddata': True,
'applyonlineflags': True, 'fftmode': 'cuda', 'clustercands': (4,3)}

st = rfpipe.state.State(sdmfile='/lustre/aoc/projects/fasttransients/staging/realfast_19A-393_TEST_B2319_000.58602.86878855324_1556572173889/', sdmscan=1, inprefs=prefs,
preffile=os.path.join(workdir, 'realfast.yml'))

I can't reproduce this in the development branch. Are you using that?

Yes, I am using the development branch, and am facing this issue with other SDM files as well.

Could you try updating lxml and installing the latest realfast code?

I updated lxml, and installed the latest development code, but I still get this error.

Oh, have you tried installing the latest sdmpy? It hasn't changed much, but the development branch in realfastvla/sdmpy repo may be more up to date.
Also, let me know if you were using the pip version of sdmpy. If that one is not working, then I should push a new version to pypi.