ramakrishnas

ecmp_pipeline

CNV and MSI analysis of ecmp

scrna_mitf

1kgenome

extracting data from 1kgenome

2017-09-22-ramaswc

BBMap

(Not Offical) BBMap short read aligner, and other bioinformatic tools.

bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

configs

Config files used to define parameters specific to compute environments at different Institutions

datasciencecoursera

data science tool box

entrez_gen2phy

flt3_itd

FLT3 ITD reads

genei

checking gene symbols with aliases and previous

metaWRAP

MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis

my_postcard

My_website

professional-programming

A collection of learning resources for curious software engineers

python

python-jumpstart-course-demos

Contains all the "handout" materials for my Python Jumpstart by Building 10 Apps course. This includes try it yourself and finished versions of the 10 apps.

ramakrishnas.github.io

saftware_carpentry

VIA_pipeline

pipeline to annotate variants with Torrent server output