racalzadilla

mypmfs

KPP

The KPP kinetic preprocessor is a software tool that assists the computer simulation of chemical kinetic systems

RiboVision

basics

How to start with Jupyter, Python, Libs, Github and Models

TAR_Thermodynamic_Model

storm-control

Microscope control software

QuickFit3

A data evaluation package for (imaging) fluorescnece correlation spectroscopy and other biophysical methods

plandex

AI driven development in your terminal. Designed for large, real-world tasks.

thermopy

Python library for thermodynamics.

FastChem

An ultra-fast equilibrium chemistry

VULCAN

Chemical Kinetics For Exoplanetary Atmospheres

STM

sediment transport model

MDanalysis_Workshop

Workshop - Analysis of Molecular Dynamics Simulation Using Python

IDP_phase_separation

Field-theoretic simulation and random phase approximation Python codes for polyampholyte phase-separation

FH_LLPS_simple_system

vertex-ai-samples

Notebooks, code samples, sample apps, and other resources that demonstrate how to use, develop and manage machine learning and generative AI workflows using Google Cloud Vertex AI.

RVMT

Code, scripts, some logs and general misc. from to the RNA viruses in MetaTranscriptome discovery project.

VnatNC1

Repository for data and code for BarstowLab article 30 ("Efficient Natural Plasmid Transformation of Vibrio natriegens Enables Zero-capital Molecular Biology” by Specht et al.).

flopy

A Python package to create, run, and post-process MODFLOW-based models.

RNAsketch

Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.

pandas-usaddress

The usaddress library made easy with Pandas

qiskit

Qiskit is an open-source SDK for working with quantum computers at the level of extended quantum circuits, operators, and primitives.

ecosystem

The Ecosystem consists of projects, tools, utilities, libraries and tutorials from a broad community of developers and researchers. The goal of the Ecosystem is to recognize, support and accelerate development of quantum technologies using Qiskit.

knowledge_graph

Convert any text to a graph of knowledge. This can be used for Graph Augmented Generation or Knowledge Graph based QnA

gorilla

Gorilla: An API store for LLMs

poliastro

poliastro - :rocket: Astrodynamics in Python

unisim

UniSim is a package for efficient similarity computation, fuzzy matching, and clustering of data.

fabric

fabric is an open-source framework for augmenting humans using AI. It provides a modular framework for solving specific problems using a crowdsourced set of AI prompts that can be used anywhere.

NumericalMethodsPhysicsWithPython

Codes, tutorials and other resources associated with the textbook "Numerical Methods in Physics with Python" by Alex Gezerlis

SCAPE-BYO