r2sunita

narrative

host narrative images

ui-assets

Static assets for KBase UI

narrative_method_specs

images

SetAPI

Dynamic service for managing sets

kb_stringtie

Module for running the StringTie application (http://ccb.jhu.edu/software/stringtie/index.shtml)

kb_cufflinks

Wrapper for cufflinks package

kb_tophat2

kb_hisat2

Module for running the HISAT2 application (http://ccb.jhu.edu/software/hisat2/index.shtml)

kb_Bowtie2

kb_deseq

Module for running the DESeq2 application (https://www.bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html)

kb_fastqc

fba_tools

A suite of metabolic modeling tools created using the KBase SDK

roadmap

Official roadmap for the KBase project

kbase_dev_work

Git repository for kbase sdk test

kb_cummerbund

coexpression

sk_count_contigs

KBaseRNASeq

narrative_method_specs_ci

Narrative method specs repo for use in the -ci (or other nonproduction) environments

project_guides

This repo contains documents and guides that describe project principles, how-to docs, etc.