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quanted / hem_app

django app for the human exposure model

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load 'nail polish' dose data

kdionisio opened this issue · comments

commented

Load directly to production database, after #146 is complete

commented

Command to use when loading data:

LOAD DATA LOCAL INFILE '/home/kdionisio/HEMDBLoad/S2D_daily_all_nailpolish.csv' INTO TABLE hem_app_dose FIELDS TERMINATED BY ',' ENCLOSED BY '"' ignore 1 lines (person_id, @chemical, day, dir_derm_exp, dir_derm_max, dir_derm_abs, dir_inhal_exp, dir_inhal_mass, dir_inhal_max, dir_inhal_abs, dir_ingest_exp, dir_ingest_abs, hem_app_dose.release, ind_derm_exp, ind_derm_max, ind_derm_abs, ind_inhal_exp, ind_inhal_max, ind_inhal_mass, ind_inhal_abs, ind_ingest_exp, ind_ingest_abs, out_sur, out_air, drain, waste) SET created_at = NOW(), updated_at = NOW(), chemical_id = (SELECT id FROM hem_app_chemical WHERE dtxsid = @chemical), runparams_id=14;
commented

data not valid due to bug found in S2D. Must reload with new data.

Command to load dose results into DB after chemical_id matching has been done in R. Dose results are from 7/31 S2D version.

LOAD DATA LOCAL INFILE '/home/kdionisio/HEM/output/S2D/nailpolish_OPP/Daily/S2D_daily_all_nailpolish_OPP.csv' INTO TABLE hem_app_dose FIELDS TERMINATED BY ',' ENCLOSED BY '"' ignore 1 lines (person_id, chemical_id, day, dir_derm_exp, dir_derm_max, dir_derm_abs, dir_inhal_exp, dir_inhal_mass, dir_inhal_max, dir_inhal_abs, dir_ingest_exp, dir_ingest_abs, hem_app_dose.release, ind_derm_exp, ind_derm_max, ind_derm_abs, ind_inhal_exp, ind_inhal_max, ind_inhal_mass, ind_inhal_abs, ind_ingest_exp, ind_ingest_abs, out_sur, out_air, drain, waste) SET created_at = NOW(), updated_at = NOW(), runparams_id=14;
commented

loaded into prod_hem, 4455360 records