load 'all chemicals' dose data set into DB

[Kathie Dionisio]

Note this will probably take ~9 hrs to load.
FIRST,
Delete all data from hem_app_dose with runparams_id=1 using command:

DELETE FROM hem_app_dose WHERE runparams_id=1;

This will remove all of the 'temporary' data we had associated with the 'all chemicals' run.

NEXT,
Load this file: S2D_daily_all.csv
Located at: L:\Lab\HEM\S2D Module\R\KKI edits June 2 2017\output\many_4chems\Daily
using command:

LOAD DATA LOCAL INFILE '/home/kdionisio/S2D_daily_all_many.csv' INTO TABLE hem_app_dose FIELDS TERMINATED BY ',' ENCLOSED BY '"' ignore 1 lines (person_id, @chemical, day, dir_derm_exp, dir_derm_max, dir_derm_abs, dir_inhal_exp, dir_inhal_mass, dir_inhal_max, dir_inhal_abs, dir_ingest_exp, dir_ingest_abs, hem_app_dose.release, ind_derm_exp, ind_derm_max, ind_derm_abs, ind_inhal_exp, ind_inhal_max, ind_inhal_mass, ind_inhal_abs, ind_ingest_exp, ind_ingest_abs, out_sur, out_air, drain, waste) SET created_at = NOW(), updated_at = NOW(), chemical_id = (SELECT id FROM hem_app_chemical WHERE dtxsid = @chemical), runparams_id=1; 

This will load a 'true' all chemicals run.

[Kathie Dionisio]

@dmlyons2 FYI this is still loading as of 8:42 pm 7/10/2017; any 'by chemical' plot will probably not be working until this load finishes.