chip
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32 Probe for:
- PanFlav
- Alpha
- Buny
- NairoV
Left 20 (13)
"Pan PCR" for:
- PanFlav
- Alpha
- Buny
- NairoV
PanFlav
PFlav-fAAR_326 PanFlav
TACAACATGATGGGAAAGAGAGAGAARAA
PFlav-rKR_327 PanFlav
GTGTCCCAKCCRGCTGTGTCATC
Pan Alpha, Vina-Rodriguez, 2017. Modif Eshoo.
A_VIR966_f Vina-Rodriguez et al. 2015. Modif Eshoo. PanAlpha (58-62°C)
TCCATGCTAATGCYAGAGCGTTTTCGCA
A_VIR966.R Vina-Rodriguez et al. 2015. Modif Eshoo. PanAlpha (28-49°C)
TGGCGCACTTCCAATGTCHAGGAT
V_p Vina-Rodriguez et al. 2015. Modif Eshoo. VEEV (25-63°C)
TGATCGARACGGAGGTRGAMCCATCC
Cal_Bwa_group_forward Orthobunyavirus N ORF, 210nt . Lambert-Lanciotti-2009, Bunya-S
GCAAATGGATTTGATCCTGATGCAG
Cal_Bwa_group_reverse Orthobunyavirus N ORF, 210nt. Lambert-Lanciotti-2009, Bunya-S
TTGTTCCTGTTTGCTGGAAAATGAT
Bun_group_forward Orthobunyavirus N ORF, 250nt. Lambert-Lanciotti-2009, Bunya-S
CTGCTAACACCAGCAGTACTTTTGAC
Bun_group_reverse Orthobunyavirus N ORF, 250nt. Lambert-Lanciotti-2009, Bunya-S
TGGAGGGTAAGACCATCGTCAGGAACTG
Wyeomyia_forward Orthobunyavirus N ORF, 230nt. Lambert-Lanciotti-2009, Bunya-S
ATGTCTGAAATTGTATTTGATGATATTGG
Wyeomyia_reverse Orthobunyavirus N ORF, 230nt. Lambert-Lanciotti-2009, Bunya-S
TATTTCGATTCCCCGGAAAGT
Oropouche_forward Orthobunyavirus N ORF, 300nt. Lambert-Lanciotti-2009, Bunya-S
GGCCCATGGTTGACCTTACTTT
Oropouche_reverse Orthobunyavirus N ORF, 300nt. Lambert-Lanciotti-2009, Bunya-S
ACCAAAGGGAAGAAAGTGAAT
Phlebo_forward_1 Phlebovirus N ORF, 370 nt. Lambert-Lanciotti-2009, Bunya-S
TTTGCTTATCAAGGATTTGATGC
Phlebo_reverse Phlebovirus N ORF, 370 nt. Lambert-Lanciotti-2009, Bunya-S
TCAATCAGTCCAGCAAAGCTGGGATGCATCAT
Phlebo_forward_2 Phlebovirus N ORF, 370 nt. Lambert-Lanciotti-2009, Bunya-S
TTTGCTTATCAAGGATTTGACC
Pan NairoV, Lambert-Lanciotti-2009, Bunya-S ?
Nairo_forward #530. Nairovirus S - N ORF, 400 nt. Lambert-Lanciotti-2009, Bunya-S
TCTCAAAGAAACACGTGCCGC
Nairo_reverse #527. Nairovirus S - N ORF, 400 nt. Lambert-Lanciotti-2009, Bunya-S
GTCCTTCCTCCACTTGWGRGCAGCCTGCTGGTA
CCHFV-S, Sas, Vina-Rodriguez-2018
Sas, Vina-Rodriguez-2018
CCHF-I-f Genome positiona 1,068–1,095. Sas, Vina-Rodriguez-2018
CAAGAGGCACTAAAAAAATGAAGAAGGC
CCHF-II-f Genome positiona 1,068–1,095. Sas, Vina-Rodriguez-2018
CAAGGGGYACCAARAAAATGAAGAAGGC
CCHF-III-f Genome positiona 1,068–1,095. Sas, Vina-Rodriguez-2018
CAAGAGGTACCAAGAAAATGAAGAAGGC
CCHF-IV-f Genome positiona 1,068–1,095. Sas, Vina-Rodriguez-2018
CAAGGGGTACCAAGAAAATGAAGAARGC
CCHF-V-f Genome positiona 1,068–1,095. Sas, Vina-Rodriguez-2018
CAAGGGGGACCAARAAAATGAAAAAGGC
CCHF-VI-f Genome positiona 1,068–1,095. Sas, Vina-Rodriguez-2018
CAAGGGGCACCAAGAAAATGAAGAAAGC
CCHF-deg-f Genome positiona 1,068–1,095. Sas, Vina-Rodriguez-2018
CAAGGGGKACCAAGAAAATGAARAAGGC
CCHF-I-r 1,223–1,248. Sas, Vina-Rodriguez-2018
GCAACAGGGATGGTTCCAAAGCAAAC
CCHF-II-r 1,223–1,248. Sas, Vina-Rodriguez-2018
GCYACRGGGATGGTTCCRAAGCAGAC
CCHF-III-r 1,223–1,248. Sas, Vina-Rodriguez-2018
GCCACGGGGATTGTCCCAAAGCAGAC
CCHF-IV-r 1,223–1,248. Sas, Vina-Rodriguez-2018
GCCACAGGGATTGTTCCAAAGCAGAC
CCHF-V-r 1,223–1,248. Sas, Vina-Rodriguez-2018
GCAACAGGGATTGTTCCAAAGCAGAC
CCHF-VI-r 1,223–1,248. Sas, Vina-Rodriguez-2018
GCTACAGGAATTGTCCCAAAGCAGAC
CCHF-deg-r 1,223–1,248. Sas, Vina-Rodriguez-2018
GCMACAGGGATTGTYCCAAAGCAGAC
CCHF-probe-1 6-FAM--BHQ1 1,172–1,198. Sas, Vina-Rodriguez-2018
ATCTACATGCACCCTGCYGTGYTGACA
CCHF-probe-2 6-FAM- -BHQ1 1,101–1,128. Sas, Vina-Rodriguez-2018
TTCTTCCCCCACTTCATTGGRGTGCTCA