pudima's repositories
bootstrap
The most popular HTML, CSS, and JavaScript framework for developing responsive, mobile first projects on the web.
CellAnnotationTutorial
Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods
colon_cancer_patients_CNV
Extract B-Allele Fraction from scRNA seq data of patiens
DropletQC
Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data
DropletQC-1
Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data
GEO
need to learning
gitignore
A collection of useful .gitignore templates
grf
:exclamation: This is a read-only mirror of the CRAN R package repository. grf — Generalized Random Forests. Homepage: https://github.com/grf-labs/grf Report bugs for this package: https://github.com/grf-labs/grf/issues
mdmcda
A mirror of the GitLab repository at https://gitlab.com/r-packages/mdmcda
MicrogliaMegaAtlas
The biggest microglia single-cell RNAseq dataset ever
MSscRNAseq2019
Analysis for 2019 submission "Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis" Schafflick1, Xu, Hartlehnert1 et. al
scell_lung_adenocarcinoma
This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset
SCENICprotocol
A scalable SCENIC workflow for single-cell gene regulatory network analysis
scRNA-marker-gene-Annotation
scRNA-marker-gene-Annotation.
scRNA.seq.course
Analysis of single cell RNA-seq data course
seurat
R toolkit for single cell genomics
spectrum_tme
preprocessing and figures for SPECTRUM TME paper
SPOTlight
Spatial Transcriptomics Capture Location Deconvolution
Workshop
课题组每周研讨会