GetMultiChannelScalingTileComposite option
tryphoncosinus opened this issue · comments
Hello,
MEXlibCZI is a very useful program.
h = MEXlibCZI('Open','/Data/MyFile.czi') % Working command
b1=MEXlibCZI('GetMultiChannelScalingTileComposite',h,[0 0 139758 103021],'',0.005); % This does not work
I get this message : One or more output arguments not assigned during call to "MEXlibCZI".
Other MexlibCZI options works fine.
Anything to do ?
Thnak you!
My config:
{'VersionString' } {'0.1.0-alpha' }
{'LibraryName' } {'MEXlibCZI' }
{'CompilerIdentification'} {'GNU 9.3.0' }
{'libCZIVersion' } {'0.45' }
{'libCZIRepoUrl' } {'https://github.com/ptahmose/libCZI.git' }
{'libCZIRepoBranch' } {'master' }
{'libCZIRepoTag' } {'5bb2d5402a859f1ae5cf09459c2e982dec2533b2'}
MEXlibCZI downloaded from 20211015.2 link
Ubuntu 20.04
MATLAB 2021b
Thanks for trying "MEXlibCZI".
Hmm, what could wrong in your case - the third argument ("plane coordinate") must uniquely identify a plane, and what coordinates must be given here depends on the CZI-document (c.f. here and here, ch. "command ChannelComposite"). So e.g. if the CZI contains a Z-stack, you have to specify the Z-index here (e.g. 'Z5'). This can only be an empty string if the document contains only one plane.
To check for this, running
info=MEXlibCZI('GetInfo',h)
should be helpful, then inspect the property "dimBounds"
Hope this helps, otherwise - if you can provide me the CZI you are testing with, I'll try to have a look.
Clearly I misunderstood this third argument. I tried and it works as it should. Thank you for this explanation!
