Simpler Modeller
python script that takes a fasta alignment. Writes pir and modpy files
usage
$ python bin/create_modeller_inputs.py query example/example_alignment.fasta /scratch1/NOT_BACKED_UP/dbuchan/pdb/ftp.wwpdb.org/pub/pdb/data/structures/all/pdb/ /webdata/data/cath_pdb/ 0
$ /scratch0/NOT_BACKED_UP/dbuchan/Applications/modeller9.17/bin/mod9.17 query.mod.py