Prashanthi Ravichandran's repositories
awesome-cheatsheets
📚 Awesome cheatsheets for popular programming languages, frameworks and development tools. They include everything you should know in one single file.
CRN_modified
Iyer Research Group, Columbia University Medical Center
detect
MATLAB toolbox for continuous event detection
Detubulated_Rapid_Approx
Purkinje cell in MATLAB using the Rapid Equilibrium Approximation for sarcolemmal shell
intro-numerical-methods
Jupyter notebooks and other materials developed for the Columbia course APMA 4300
MetaXcan
MetaXcan software and manuscript
numerical-methods-pdes
Jupyter notebook class notes for Numerical Methods for PDEs
Purkinje-Model
A model of the Purkinje cell with spatial diffusion and RyR receptor heterogeneity.
Purkinje_common_pool
This description remodels the release in the interior of the cell using a common pool formulation
Rapid-Equilibrium-Approx
Explicit definition of the dyadic concentrations to reduce time step
recount3_networks
Scripts required to replicate the analysis in - "Aggregation of publicly available RNA-seq experiments improves inference of consensus and tissue-specific Gene Co-expression Networks"
recountWorkshop
Package for the recount workshop for BioC2017
SC_eQTL
Single cell eQTL calling
Stochastic-Canine-
Stochastic simulation of the canine ventricular cell using rk54 prince dormund integrator
Tubulated-Ca-Cycling
Stochastic code for the excitation contraction coupling in MATLAB
twn_tsn
Transcriptome-wide network
xCell
Cell types enrichment analysis