Prachand's repositories
pycoQC
pycoQC computes metrics and generates Interactive QC plots from the sequencing summary report generated by Oxford Nanopore technologies basecaller (Albacore/Guppy)
TwoSampleMR
R package for performing 2-sample MR using MR-Base database
minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
megalodon
Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by anchoring the information rich basecalling neural network output to a reference genome/transriptome.
pycoMeth
DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets
tidytuesday
Official repo for the #tidytuesday project
meffil
Efficient algorithms for analyzing DNA methylation data.