poissonconsulting / jaggernaut

An R package to perform Bayesian analyses using JAGS (Just Another Gibbs Sampler).

poissonconsulting/jaggernaut Issues

checking that adaption complete
Closed 6 years ago1
update.jags_analysis option to change what monitor
Closed 6 years ago
test case fixed versus random for base
Closed 6 years ago
predictive_check throws error if data has one or more columns that no duplicates
Closed 6 years ago
modify_data_derived used in place of data_derived if not defined - shouldn't happen
Closed 6 years ago
modify if possible to pass no data
Closed 6 years ago
prediction should not filter out columns that are not in input data
Closed 6 years ago
predict should have correct_by arg for decentering and destandardising
Closed 6 years ago
for submission to CRAN
Closed 6 years ago
beepr - add beeps when quiet = FALSE
Closed 6 years ago
define variables/parameters as argument to jags_model
Closed 6 years ago
allow part to specify individual elements of vector
Closed 6 years ago
modify_data syntatic issue
Closed 6 years ago2
querying jags_analysis produces single objects or lists depending on the number of elements
Closed 6 years ago
need [] and [<- indices to look up and set elements of jags_analysis and jags_models
Closed 6 years ago
implement HPD CRIs
Closed 6 years ago
rename variables in `select_data` and `select_data_derived`
Closed 6 years ago
update.jags_analysis throws error
Closed 6 years ago3
ability to pull out and then use mcmc objects with coda
Closed 6 years ago
ability to pull out and use jags objects with rjags functions
Closed 6 years ago
relabel convergence parameter as rhat in summary table
Closed 6 years ago
perhaps stop using rownames to label parameters in coef table - add character variable instead
Closed 6 years ago
sort parameters in coef table correctly
Closed 6 years ago
use closures for setting in options
Closed 6 years ago
replace subset with indexing for subset.data.frame
Closed 6 years ago1
possibly use init_values in jags object of jagr_chains
Closed 6 years ago
as. functions return NA if unsuccessful
Closed 6 years ago
when entering option to pass centre factor for derived code
Closed 9 years ago1
add ability to get mean and SD for centered predictors
Closed 9 years ago1
crashes if jags_analysis(..., mode="paper") and automatically updates
Closed 10 years ago1
replace subset(object, model = 1) with subset(object, model_id = 1)?
Closed 10 years ago1
want combine jags_sample but not collapse single value
Closed 10 years ago
Display and use model names rather than numbers
Closed 10 years ago1
when integer picks first value for newdata....
Closed 10 years ago1
rename opts_jagr as opts_jags
Closed 10 years ago1
estimate function for plotting fitted values
Closed 10 years ago1
define rhat.jags_sample
Closed 10 years ago1
n.thin
Closed 10 years ago1
get code on github for key software
Closed 10 years ago1
Take unconverged into account when doing power for jags_power_analysis
Closed 10 years ago1
power analysis option to stop and then continue
Closed 10 years ago1
DIC is NA on windows
Closed 10 years ago1
calculate CIs for power based on small sample size
Closed 10 years ago1
how to install juggler?
Closed 10 years ago1
Remove mention of nrow in jags_model documentation
Closed 11 years ago1
add as.data.frame.jags_data_frame etc
Closed 11 years ago1
use itertools to divide jobs into parts for parallel processing
Closed 11 years ago1
get code on github for inspiration: R2WinBUGS, BRugs, R2Jags, runjags, rube
Closed 11 years ago
jags_analysis losing track of random effects when fails to converge immediately
Closed 11 years ago1
make estimate mean by default and set whether mean or median through options
Closed 11 years ago1