plankter / TPParser

TumorProfiler parser.

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tpparser

Tool to parse SOP data

Installation

Use the pip installation manger to directly install the package from Github:

pip install git+https://github.com/BodenmillerGroup/tpparser.git

Usage

tpparser -i "/input/test.md" -o "/output/test.csv" -f csv
Arguments Description
-i, --input Input .md file name
-o, --output Output file name
-f, --format Output format: json (default) or csv

About

TumorProfiler parser.


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Language:Python 100.0%