Global Change Research Group's repositories
how_we_work
Group resources and operating procedures
OceanAdapt
Scripts and data for OceanAdapt website to visualize shifts in marine animal distributions
pinskylab_methods
Methods used by many of us in the lab
dynamic_range_model
dynamic range models and forecast methods
laboratory
wet lab protocols including sequencing library preparation
project_velocity
Project climate velocity for marine animals in North America out to 2100
SRA-submission
Michelle's repo to keep track of how to submit to the sequencing read archive aka short read archive
climate_community_crossrealm
Comparisons of community responses to temperature change across realms
Fish_regression_ABC
Regression approximate bayesian computation (RABC) algorithm for parameter estimation and inference in a size-structured population model.
globalFishGenetics
Global marine patterns of fish genetic diversity
Phils_GIS_R
Clownfish map making, from scripts to QGIS files
RepoNavigation
This directory is intended to act as a central navigation hub of the Pinsky lab GitHub
A_clarkii_transcriptomics
scripts, data, and plots for Amphiprion clarkii transcriptomics project
arg_coral_reefs
Code to accompany Pinsky et al. 2023 Coral Reef Population Genomics in an Age of Global Change. Annual Review of Genetics
Atlantic_croaker_range
Data and code for the genomic analysis of Atlantic croaker (Micropogonias undulatus) and incorporation of genomic data into range projections of the species.
CamotesROMS
Project comparing observed larval dispersal against oceanographic mmodels for the Camotes Sea, Philippines.
Clownfish_persistence
Allison's clownfish metapopulation persistence analysis
ClownfishGWAS
Katrina Catalano's data and code for project investigating associations between larval traits and genotypes from Expressed Exome Capture Sequencing in Amphiprion percula.
clownfishr
R package to interact with Pinsky Lab clownfish data
ebs_dissimilarity_time_sensitivity
Exploration of the effects of spatial and temporal scale on biotic homogenization using the Eastern Bering Sea as a test case. Zoë Kitchel dissertation chapter.
lab-manual
Fay Lab Manual / how we work