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pinellolab / DNA-Diffusion

🧬 Generative modeling of regulatory DNA sequences with diffusion probabilistic models 💨

Home Page:https://pinellolab.github.io/DNA-Diffusion/

Repository from Github https://github.compinellolab/DNA-DiffusionRepository from Github https://github.compinellolab/DNA-Diffusion

core integration tests

noahweber1 opened this issue · comments

commented

After the refactoring is done, core integration tests have priority just to make sure when multiple people are adding the basic features, we are not breaking things:

  1. Core integration test - training. Currently lacking: atleast one comprehensive e2e test, that indicates improvements or not (in terms of speed and accuracy) - P1
  2. Upload the weights of the trained model serving as baseling (such that the next point can be executed) - P1
  3. Core integration test - inference. Currently lacking: atleast one comprehensive e2e test, that indicates improvements or not in terms of inference (in terms of speed and accuracy) - P1
commented

This issue is stale because it has been open for 60 days with no activity.

commented

This issue was closed because it has been inactive for 7 days since being marked as stale.