picrust / picrust2

Code, unit tests, and tutorials for running PICRUSt2

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how long should full pipeline command run?

mayagabitzsch opened this issue · comments

hello, I have a huge data set that I just started running through picrust2. I know that it will take a long time, but im curious about an actual estimate. its over 10,000. I started the program and the terminal says its on hmmalign. No issues so far thankfully. I am running it on my mac which does not have a big RAM and did p 1

Hi there,

I believe the runtime should be a couple of hours at most if I am remembering correctly.

I am just closing this as it doesn't seem that there's an issue here. Please let me know if I need to reopen it.