phybrain / efficient_densenet_tensorflow-1

A memory efficient implementation of densenet.

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efficient_densenet_tensorflow

A Tensorflow 1.9+ implementation of DenseNet-121, optimized to save GPU memory.

Based on the following repo's code:

https://github.com/Jiankai-Sun/Distributed-TensorFlow-Example/tree/master/CIFAR-10

https://github.com/titu1994/keras-squeeze-excite-network

Motivation

While DenseNets are fairly easy to implement in deep learning frameworks, most implementations (such as the original) tend to be memory-hungry. In particular, the number of intermediate feature maps generated by batch normalization and concatenation operations grows quadratically with network depth.

It is worth emphasizing that this is not a property inherent to DenseNets, but rather to the implementation.

This implementation uses a new strategy to reduce the memory consumption of DenseNets. It is based on efficient_densenet_pytorch. It makes use of checkpointing intermeditate features and alternate approach.

This adds 15-20% of time overhead for training, but reduces feature map consumption from quadratic to linear.

For more details, please see the technical report.

How to checkpoint

Currently all of the dense layers are checkpointed, however you can alter the implementation to trade of speed and memory. For example by checkpointing earlier layers you remove intermediate checkpoints which are generally larger earlier on due to the pooling layers.

However more strategies can be found in the alternate approach.

Example setup for a 12gb Nvidia GPU

python train.py --batch_size 6000 --efficient True

python train.py --batch_size 3750

Main piece of code:

models/densenet_creator.py#116

        def _x(ip):
            x = batch_normalization(ip, **self.bn_kwargs)
            x = tf.nn.relu(x)

            if self.bottleneck:
                inter_channel = nb_filter * 4

                x = conv2d(x, inter_channel, (1, 1), kernel_initializer='he_normal', padding='same', use_bias=False,
                           **self.conv_kwargs)
                x = batch_normalization(x, **self.bn_kwargs)
                x = tf.nn.relu(x)

            x = conv2d(x, nb_filter, (3, 3), kernel_initializer='he_normal', padding='same', use_bias=False,
                       **self.conv_kwargs)

            if self.dropout_rate:
                x = dropout(x, self.dropout_rate, training=self.training)

            return x

        if self.efficient:
            # Gradient checkpoint the layer
            _x = tf.contrib.layers.recompute_grad(_x)

Requirement

  • Tensorflow 1.9+
  • Horovod

Usage

If you care about speed, and memory is not an option, pass the efficient=False argument into the DenseNet constructor. Otherwise, pass in efficient=True.

Important Options:

  • --batch_size (int) - The number of images per batch (default 3750)

  • --fp16 (bool) - Whether to run with FP16 or not (default False)

  • --efficient (bool) - Whether to run with gradient checkpointing or not (default False)

Reference

@article{pleiss2017memory,
  title={Memory-Efficient Implementation of DenseNets},
  author={Pleiss, Geoff and Chen, Danlu and Huang, Gao and Li, Tongcheng and van der Maaten, Laurens and Weinberger, Kilian Q},
  journal={arXiv preprint arXiv:1707.06990},
  year={2017}
}

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A memory efficient implementation of densenet.


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