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Pangenomics with embeddings (pg-space)

Pangenomics with embeddings

pg-space

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Pangenomics with embeddings's repositories

panspace

Embedding-based indexing for compact storage, rapid querying, and curation of bacterial pan-genomes

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fcgr

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gs-reasmb

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panspace-paper

snakemake pipeline to reproduce the experiments with panspace on the 661k bacterial dataset.

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