Charl1e (pepperbubble)

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Charl1e's starred repositories

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CheXzero

This repository contains code to train a self-supervised learning model on chest X-ray images that lack explicit annotations and evaluate this model's performance on pathology-classification tasks.

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MRM-pytorch

An official implementation of Advancing Radiograph Representation Learning with Masked Record Modeling (ICLR'23)

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plip

Pathology Language and Image Pre-Training (PLIP) is the first vision and language foundation model for Pathology AI (Nature Medicine). PLIP is a large-scale pre-trained model that can be used to extract visual and language features from pathology images and text description. The model is a fine-tuned version of the original CLIP model.

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CONCH

A vision-language foundation model for computational pathology - Nature Medicine

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RadFM

The official code for "Towards Generalist Foundation Model for Radiology by Leveraging Web-scale 2D&3D Medical Data".

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Awesome-Medical-Dataset

Collection of awesome medical dataset resources.

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FairCLIP

[CVPR 2024] FairCLIP: Harnessing Fairness in Vision-Language Learning

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roco-dataset

Radiology Objects in COntext (ROCO): A Multimodal Image Dataset

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medicat

Dataset of medical images, captions, subfigure-subcaption annotations, and inline textual references

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FFA-IR

The official start-up code for paper "FFA-IR: Towards an Explainable and Reliable Medical Report Generation Benchmark."

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d2l-zh

《动手学深度学习》:面向中文读者、能运行、可讨论。中英文版被70多个国家的500多所大学用于教学。

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Mamba-UNet

Mamba-UNet Zoo

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mamba

Mamba SSM architecture

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RegionContrast

Region-aware Contrastive Learning for Semantic Segmentation, ICCV 2021

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ContrastiveSeg

ICCV2021 (Oral) - Exploring Cross-Image Pixel Contrast for Semantic Segmentation

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SimCLR

PyTorch implementation of SimCLR: A Simple Framework for Contrastive Learning of Visual Representations

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U-KAN

[ArXiv' 24] U-KAN Makes Strong Backbone for Medical Image Segmentation and Generation

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Medical-Image-Segmentation

MedSeg: Medical Image Segmentation GUI Toolbox 可视化医学图像分割工具箱

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Explicit-Visual-Prompt

[CVPR 2023] Explicit Visual Prompting for Low-Level Structure Segmentations

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pytorch-image-models

The largest collection of PyTorch image encoders / backbones. Including train, eval, inference, export scripts, and pretrained weights -- ResNet, ResNeXT, EfficientNet, NFNet, Vision Transformer (ViT), MobileNetV4, MobileNet-V3 & V2, RegNet, DPN, CSPNet, Swin Transformer, MaxViT, CoAtNet, ConvNeXt, and more

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Mask2Former

Code release for "Masked-attention Mask Transformer for Universal Image Segmentation"

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ViT-pytorch

Pytorch reimplementation of the Vision Transformer (An Image is Worth 16x16 Words: Transformers for Image Recognition at Scale)

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TransUNet

This repository includes the official project of TransUNet, presented in our paper: TransUNet: Transformers Make Strong Encoders for Medical Image Segmentation.

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ARL

The pytorch implement for Attention Residual Learning for Skin Lesion Classification

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Painter

Painter & SegGPT Series: Vision Foundation Models from BAAI

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Personalize-SAM

Personalize Segment Anything Model (SAM) with 1 shot in 10 seconds

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one-prompt

the official repository for CVPR 2024 paper "One-Prompt to Segment All Medical Images"

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awesome-segment-anything

Tracking and collecting papers/projects/others related to Segment Anything.

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