Builds a PEP from SRA or GEO accessions
Home Page:https://pep.databio.org/geofetch/
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khoroshevskyi opened this issue a year ago · comments
For small basic file, the most time consumption is taking fetching data (API)
for bigger projects (>1000) the most time consuming is also API:
The most time consuming function besides API is this:
@nsheff I think it doesn't worse to spend time on speeding time on this issue, as most time consuming function is hitting endpoints and downloading soft files