Oliver Ziff's repositories
als_genome_instability
Meta-analysis of ipsc-derived motor neurons in ALS
ALS_astrocyte_intron_retention
Scripts for the ALS astrocyte intron retention project
als_mrna_rbp_localisation
Code to reproduce analyses and figures from the manuscript of mRNA and protein mislocalisation in ALS
Language:R000
ALS_reactive_astrocytes_meta
This repository contains scripts to analyse the data and reproduce the figures from the ALS astrocyte meta-analysis A1 paper
Language:R000
ALS_SpinalCord_QTLs
Data Portal for NYGC ALS Spinal Cord
Language:HTML000
fetchngs
Pipeline to fetch metadata and raw FastQ files from public databases
Language:GroovyMIT000
hpc-notes
Notes on using Crick HPC
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Language:HTML000
pins
Pin, Discover and Share Resources
Language:RNOASSERTION000
rnafusion
RNA-seq analysis pipeline for detection gene-fusions
Language:NextflowMIT000
rnaseq
RNA sequencing analysis pipeline using STAR, HISAT2 and Salmon with gene counts and quality control
Language:NextflowMIT000
RNAseqCNV
R package for large-scale CNV analysis from RNA-seq
Language:R000