nroldanf

hmmer

HMMER: biological sequence analysis using profile HMMs

sports

computer vision and sports

coco-annotator

:pencil2: Web-based image segmentation tool for object detection, localization, and keypoints

ignite

High-level library to help with training and evaluating neural networks in PyTorch flexibly and transparently.

mmaction2

OpenMMLab's Next Generation Video Understanding Toolbox and Benchmark

basketballVideoAnalysis

Basketball_Homography

ffmpeg-python

Python bindings for FFmpeg - with complex filtering support

ffprobe-python

A wrapper of ffprobe command to extract metadata from media files.

PRMLT

Matlab code of machine learning algorithms in book PRML

prml

Repository of notes, code and notebooks in Python for the book Pattern Recognition and Machine Learning by Christopher Bishop

pytorch-openpose

pytorch implementation of openpose including Hand and Body Pose Estimation.

hqq

Official implementation of Half-Quadratic Quantization (HQQ)

AQLM

Official Pytorch repository for Extreme Compression of Large Language Models via Additive Quantization https://arxiv.org/pdf/2401.06118.pdf

VideoBooth

[CVPR2024] VideoBooth: Diffusion-based Video Generation with Image Prompts

draw_rna

Draw RNA secondary structures in python.

RT-DETR

[CVPR 2024] Official RT-DETR (RTDETR paddle pytorch), Real-Time DEtection TRansformer, DETRs Beat YOLOs on Real-time Object Detection. 🔥 🔥 🔥

dockernel

Dockerized Jupyter kernels.

jedi-language-server

A Python language server exclusively for Jedi. If Jedi supports it well, this language server should too.

dspy

DSPy: The framework for programming—not prompting—foundation models

langfuse

🪢 Open source LLM engineering platform: Observability, metrics, evals, prompt management, playground, datasets. Integrates with LlamaIndex, Langchain, OpenAI SDK, LiteLLM, and more. 🍊YC W23

tensordict

TensorDict is a pytorch dedicated tensor container.

sequence_manipulation_suite

A collection of simple JavaScript programs for generating, formatting, and analyzing short DNA and protein sequences. The Sequence Manipulation Suite is commonly used by molecular biologists, for teaching purposes, and for program and algorithm testing.

gt4sd-core

GT4SD, an open-source library to accelerate hypothesis generation in the scientific discovery process.

RFdiffusion

Code for running RFdiffusion

seqviz

a JavaScript DNA, RNA, and protein sequence viewer

diffab

✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)

IgFold

Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies

msa

Modular BioJS compoment for a multiple sequence alignment

regression-transformer

Regression Transformer (2023; Nature Machine Intelligence)