Giters

nextstrain / nextclade

Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement

Home Page:https://clades.nextstrain.org

Geek Repo:Geek Repo

Github PK Tool:Github PK Tool

Can Nextclade be used for HIV data?

liamxg opened this issue · comments

commented

Yes, Nextclade can in principle be used for HIV sequences - we're working on a dataset to make it straightforward. First we have to get v3 out which contains features that make Nextclade work better for HIV.

commented

@corneliusroemer thank you for sharing this information, can not wait for this.