neherlab / pan-genome-analysis

Processing pipeline for pan-genome visulization and exploration

Home Page:http://pangenome.de

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No module Numpy

pavlohrab opened this issue · comments

I am using Google cloud to run panX : Ubuntu 18.04.
The following error arises:
Traceback (most recent call last):
File "./panX.py", line 6, in
from pangenome_computation import pangenome
File "/home/paul_hrab05/pan-genome-analysis/scripts/pangenome_computation.py", line 3, in
from cluster_collective_processing import clusterCollector
File "/home/paul_hrab05/pan-genome-analysis/scripts/cluster_collective_processing.py", line 1, in
from sf_geneCluster_align_makeTree import cluster_align_makeTree
File "/home/paul_hrab05/pan-genome-analysis/scripts/sf_geneCluster_align_makeTree.py", line 1, in
import numpy as np
ImportError: No module named numpy

However, numpy is installed. I was trying install via conda and pip - "module is installed". run_Test.sh encountered the same error.
Can you help me?
Thanks!