ncsl / seek

(Stereotatic ElectroEncephalography Kit) Run reconstruction, co-registration, electrode localization and surface/atlas rendering for iEEG, T1 MRI and CT data.

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Fix orientation of either MRI, or CT, so coregistration works

adam2392 opened this issue · comments

Use either nibabel, FSL, or other program to orient the CT image correctly before coregistration takes place.

ACPC auto-detection and re-alignment to RAS for both CT and MRI images was added in #23.