nanoporetech / barcoding

Naïve barcode deconvolution for amplicons

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barcoding

This repository is part of the ONT Barcoding Protocol for amplicons.

Data

The dataset (in t/data/) was prepared with two barcodes for illustrative purposes.

Scripts

Scripts can be found in the bin/ subdirectory.

Prerequisites

The main prerequisites are listed below, with a complete list available in Build.PL:

  • Bio::Perl
  • Text::LevenshteinXS
  • Readonly

All should be available from CPAN (UNIX/Strawberry systems: "cpan ") or PPD (for ActivePerl)

Testing

make test

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Naïve barcode deconvolution for amplicons

License:Mozilla Public License 2.0


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