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nanopore-wgs-consortium
/
NA12878
Data and analysis for NA12878 genome on nanopore
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53
Issues:
87
Forks:
93
nanopore-wgs-consortium/NA12878 Issues
Any plans for releasing ONT Duplex data?
Updated
7 months ago
where should i find events in rel6?
Updated
a year ago
Difficulties in finding NA12878 ONT data
Closed
2 years ago
Comments count
2
high quality SV callset
Updated
2 years ago
Basecalls on latest super accuracy models
Closed
2 years ago
Comments count
4
Deuplicate read IDs in RNA dataset: Bham2_Run
Updated
2 years ago
Comments count
2
Format of FAST5 files in rel6
Closed
2 years ago
Comments count
1
Variants in High Confidence VCF and FASTQ Output have 0 intersection
Closed
3 years ago
number of reads in summary and fastq files do not match
Closed
3 years ago
Comments count
2
TE/CDS annotation gff
Closed
3 years ago
Comments count
1
ultra long reads
Closed
3 years ago
Comments count
1
Cannot Download Samples of Rel6 DNA Data
Closed
3 years ago
Comments count
1
why are there two bulk fast5 files for direct Notts RNA run2 ?
Closed
4 years ago
Comments count
1
Where is CHR22?
Closed
4 years ago
Comments count
2
Nucleotide symbol "U" rather than "T" found in cDNA
Closed
4 years ago
Comments count
2
Duplicate reads in Native RNA fastq file
Closed
4 years ago
Comments count
5
Sequencing data for in-vitro oligomer ligation assay (Figure 6C)
Updated
4 years ago
Comments count
1
rel6 version
Closed
4 years ago
Comments count
1
IVT Sequence for EEF2
Closed
5 years ago
ONT Sequencing data for Figure 6b and 6c
Updated
5 years ago
Comments count
2
cDNA reads aligning poorly
Updated
5 years ago
Comments count
1
GENCODE-sensitive dataset
Updated
5 years ago
Comments count
2
FAST5 files for cDNA reads
Updated
5 years ago
Comments count
3
Summary file for cDNA data
Closed
5 years ago
Comments count
3
Broken Fast5 links for the flow cells FAB45321**
Closed
5 years ago
Comments count
1
FastQ quality
Updated
5 years ago
Number of flow cells used for the ultra-long prep
Updated
5 years ago
rel6 : individual FASTQ links are broken
Updated
5 years ago
Comments count
2
Example file for nvrna.180828.180927.read.isoform.map.nodup.txt
Updated
5 years ago
bam download difficulty
Updated
5 years ago
Comments count
7
Individual FAST5 links for rel6 seem to be broken
Closed
5 years ago
Comments count
3
minimap2 version(s)?
Updated
5 years ago
Is the raw data(signal data) of rel6 the same as rel3, rel4?
Closed
5 years ago
Comments count
1
Questions about rel3 fastq files of genomic DNA project
Closed
5 years ago
Comments count
2
When will the flip-flop called data be available for the gDNA?
Closed
5 years ago
Comments count
3
Fast5 folders misnamed and not compressed?
Closed
5 years ago
Comments count
1
Date of sequencing, Guppy version and parameters for the rel5 Guppy 0.3 gDNA dataset (10kb chunk size)?
Closed
5 years ago
Comments count
1
FASTQ pass/fail files missing
Updated
5 years ago
Comments count
6
Download links for 1D cDNA dataset split by sample and center don't work?
Updated
5 years ago
Comments count
3
Wrong entry in Table at NA12878/RNA.md ?
Updated
5 years ago
Comments count
2
cDNA library protocol was stranded or unstranded ?
Updated
5 years ago
Looking for fast5 files for rel5
Closed
6 years ago
Comments count
6
NA12878.hq.sv.vcf
Updated
6 years ago
FAST5 missing
Closed
6 years ago
Comments count
4
Could you provide name of the sequencing kit using for Direct-RNA sequencing?
Updated
6 years ago
Comments count
2
question on kmer model
Updated
6 years ago
file size
Updated
6 years ago
FLAIR PSL files- missing field
Updated
6 years ago
Availability of VCF file used
Closed
6 years ago
Comments count
1
Read to Flowcell mapping
Closed
6 years ago
Comments count
3
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