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Nauman Ahmed's repositories

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A CUDA library of DNA/RNA sequence alignment algorithms.

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A generic DNA read aligner that allows to use different combinations of seeding and extension algorithms.

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Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

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BWA-MEM program accelerated with the GASAL2 library

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Small header-only C++11 to measure code execution time and performance.

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CUB is a flexible library of cooperative threadblock primitives and other utilities for CUDA kernel programming.

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Samples for CUDA Developers which demonstrates features in CUDA Toolkit

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GASE/BWA-MEM seed-extension accelerated with GASAL2

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Advanced Computing Systems Lab1 files

Language:Jupyter NotebookApache-2.0000

Mulled - Automatized Containerized Software Repository

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NVBIO is a library of reusable components designed to accelerate bioinformatics applications using CUDA.

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test copc

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