msahraeian's repositories
bamsurgeon
tools for adding mutations to existing .bam files, used for testing mutation callers
Language:PythonMIT000
convert2bed
Convert common binary and text genomic formats to BED
Language:CGPL-2.0000
cyclecloud-projects
Repo for CycleCloud Projects
Language:Shell000
fusioncatcher
Finder of Somatic Fusion Genes in RNA-seq data
Language:PythonGPL-3.0000
IDP
IDP is a statistical isoform prediction method to construct possible isoform candidates from the union of long reads and short reads with spliced alignment
Language:PythonNOASSERTION000
metasv
MetaSV: An accurate and integrative structural-variant caller for next generation sequencing
Language:PythonBSD-2-Clause000
somaticseq
An ensemble approach to accurately detect somatic mutations using SomaticSeq
Language:PythonBSD-2-Clause000