mrvollger / SDA

Segmental Duplication Assembler (SDA).

mrvollger/SDA Issues

Question on readToSNVList
Closed a year ago1
Compilation error
Closed a year ago1
What are the real dependencies for this software
Closed a year ago1
Temporary samtools sort files may be overwritten
Closed a year ago2
Default Perl version is used instead of the custom cluster Perl module
Closed a year ago3
Custom repeat libraries for RepeatMasker
Closed a year ago1
Support for large references
Closed a year ago10
BAM as expected ONT input
Closed a year ago1
qsub command line incompatible with PBS Pro
Closed a year ago3
SDA error Repeatmasker no result and pbmm2
Closed a year ago2
alternative assembler and running SDA locally
Closed 4 years ago1
How to get target original subreads bam file?
Closed 4 years ago1
support CCS data
Closed 5 years ago4
could not find drmaa library
Closed 5 years ago11
Make error
Closed 5 years ago8
de novo ProcessCollapsedAssembly.snake.sh without a reference
Closed 6 years ago2
How to run SDAtest?
Closed 6 years ago1
AmbiguousRuleException: Rules MapToDups and MapToRef
Closed 6 years ago4
Sending `MINCOV` instead of `MAXCOV` to `PrintHetFreq.py`'s `maxCount` parameter
Closed 6 years ago2