Cannot install BanditPAM in Paperspace Gradient

Question

Cannot install BanditPAM in Paperspace Gradient

tanweer-mahdi opened this issue 3 years ago · comments

Hi!

I cannot seem to install BanditPAM in the Jupyterlab in a Paperspace Gradient compute instance. I have attached a .txt file with this issue since the error message is way too large.

Thanks in advance for looking into it. Also thanks for the amazing project you are curating!
banditpam_error.txt

Mo Tiwari · Answer 1 · Sat Jan 08 2022 02:53:33 GMT+0800 (China Standard Time)

Thanks for the bug report! I'm working on a fix

Mo Tiwari · Answer 2 · Sat Jan 08 2022 14:06:58 GMT+0800 (China Standard Time)

Hi @tanweer-mahdi , could you please try : !pip install -vvv banditpam==3.0.1 inside your Gradient instance? It may take a few minutes but should work now.

I verified this works on a fresh Gradient notebook and does NOT require the paid version of Paperspace:

By the way, your error message indicates that the installed version of armadillo was too low (we require armadillo>=10.5.3 specifically for the function randperm), so I took care of installing an updated version automatically in Gradient notebooks in the setup.py, and fixed a few things so !pip install banditpam can be run on Google Colab as well

Shah Mahdi Hasan · Answer 3 · Sat Jan 08 2022 14:39:01 GMT+0800 (China Standard Time)

Hi @motiwari , installed and worked like charm! I have to say I am amazed how fast you solved this complex issue! I am working on timeseries clustering with k-Medoids. Hoping to get some good output!

Mo Tiwari · Answer 4 · Sat Jan 08 2022 15:07:16 GMT+0800 (China Standard Time)

Great, thanks @tanweer-mahdi ! Excited to see your results!