Improve HeatMap Color Range to Taxonomy
Nilad opened this issue · comments
Hi,
Is it possible to have a special range color for taxonomist user or the possibility to define (by a configuration file) a range by color ?
For the taxonomist user, they like to have a color range of 100% ANI, 99%-95%, 94%-83%, 82%-70% and 70%-0%.
Thanks for your work.
Have a good day.
Hi, @Nilad
Thank you for your suggestions for functionality improvements.
I am glad that this is my first issue for my OSS.
I thought the feature you mentioned was useful, so I implemented it in the new v1.1.0 version.
It is designed to allow specifying color range values via command option --cmap_ranges
.
ANIclustermap v1.1.0 is already available in pip install
.
It will take about 1 to 2 days to be available from conda install
.
Example1
Test dataset = small_dataset (Click link to download)
ANIclustermap -i ./small_dataset -o ./cmap_ranges_example1 --fig_width 15 --annotation \
--cmap_ranges 70,82,95,100,100
Example2
ANIclustermap -i ./small_dataset -o ./cmap_ranges_example2 --fig_width 15 --annotation \
--cmap_ranges 80,85,90,95,100 --cmap_colors cyan,blue