using multiple --tumor-sample flags for create_inputs
dtm2117 opened this issue · comments
Hello,
When trying to run the creat_inputs script for a longitudinal sample, is there anyway to specify multiple tumor IDs so that the correct VCF columns are used? Mutect outputs the tumor/normal columns alphabetically(or numerically) ordered, so being able to designate the correct columns for multiple samples would be ideal.
Is this functionality already included?
best,
David