mmoisse's repositories

gemini

a lightweight db framework for disease and population genetics.

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advanced-shiny

Shiny tips & tricks for improving your apps and solving common problems

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bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

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bioformats

Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment. Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.

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BioMine

Bioinformatics data-mining

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CharGer

Characterization of Germline variants

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cloudbiolinux

CloudBioLinux: configure virtual (or real) machines with tools for biological analyses

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conda

OS-agnostic, system-level binary package manager and ecosystem

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containerproxy

Manage HTTP proxy routes into Docker containers

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dqshiny

Enhance Shiny Apps with Customizable Modules

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Fung-Keenan2013

This repository contains the Mathematica and R code from Fung and Keenan 2013

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GenABEL

:exclamation: This is a read-only mirror of the CRAN R package repository. GenABEL — genome-wide SNP association analysis. Homepage: http://www.genabel.org, http://forum.genabel.org,<U+000a>http://genabel.r-forge.r-project.org/ Report bugs for this package: http://r-forge.r-project.org/tracker/?group_id=505

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genomics

Scripts, utilities and programs for genomic bioinformatics.

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GenVisR

Genome data visualizations

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leaflet

R Interface to Leaflet Maps

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leaflet-geoman

🍂🗺️ A Leaflet Plugin For Drawing and Editing Geometry Layers

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minfi

Devel repository for minfi

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pathview

Clone from pathview on bioconductor fixing a clash with dplyr

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pirs

profile basd Illumina pair-end Reads Simulator

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rpivotTable

A R wrapper for the great library pivottable

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scrattch.io

Functions for handling RNA-seq files and formats as input and output for scrattch functions.

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ShinySky

Various UI widgets/components not part of Shiny e.g. alerts, styled buttons

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survminer

Survival Analysis and Visualization

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Sushi

Tools for visualizing genomics data

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sysfonts

Loading Fonts into R

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transvar

TransVar - multiway annotator for precision medicine

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zero-to-shinyproxy

Deploy Shinyproxy with Helm

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