mlampros / ClusterR

Gaussian mixture models, k-means, mini-batch-kmeans and k-medoids clustering

Home Page:https://mlampros.github.io/ClusterR/

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installation problem

KhatriVivek opened this issue · comments

Please briefly describe your problem and what output you expect. If you have a question, you also have the option of
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Please give a brief description of the problem

configure: error: Header file gmp.h not found; maybe use --with-gmp-include=INCLUDE_PATH
ERROR: configuration failed for package ‘gmp’

  • removing ‘/home/jupyter/.R/library/gmp’
    ERROR: dependency ‘gmp’ is not available for package ‘ClusterR’
  • removing ‘/home/jupyter/.R/library/ClusterR’

The downloaded source packages are in
‘/tmp/Rtmpd0gtrP/downloaded_packages’
Warning messages:
1: In install.packages("ClusterR") :
installation of package ‘gmp’ had non-zero exit status
2: In install.packages("ClusterR") :
installation of package ‘ClusterR’ had non-zero exit status

Please add your Operating System (e.g., Windows10, Macintosh, Linux) and the R version that you use (e.g., 3.6.2)

Linux

If my package uses Python (via 'reticulate') then please add also the Python version (e.g., Python 3.8) and the 'reticulate' version (e.g., 1.18.0)

Linux in the Google Cloud Platform environment

R 4.1.1

hi @KhatriVivek,
it seems that libgmp is not installed in your Linux instance. First, you have to install this system requirement using,

sudo apt-get install libgmp3-dev

and then retry installing the ClusterR package.

Thank you so much. Now the package installs successfully. Have a great day