Mladen Rasic's repositories
atlas
ATLAS - Three commands to start analyzing your metagenome data
awesome
😎 Awesome lists about all kinds of interesting topics
Awesome-Bioinformatics
A curated list of awesome Bioinformatics libraries and software.
biocode
Bioinformatics script collection
bioinformatics-one-liners
Bioinformatics one liners from Ming Tang
biopython
Official git repository for Biopython (originally converted from CVS)
DESMAN
De novo Extraction of Strains from MetAgeNomes
flask
A microframework based on Werkzeug, Jinja2 and good intentions
Hannigan_CRCVirome_mBio_2018
Investigating the gut virus communities associated with colon cancer.
MAGpy
Snakemake pipeline for downstream analysis of metagenome-assembled genomes (MAGs) (pronounced mag-pie)
mladen5000.github.io
Finn-Perkins website
oldweb
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
Python-Algorithms
All Algorithms implemented in Python
python-quickstart-codespaces
MSLearn sample code
scientific-visualization-book
An open access book on scientific visualization using python and matplotlib
scikit-bio
scikit-bio is an open-source, BSD-licensed, Python package providing data structures, algorithms, and educational resources for bioinformatics.
skills-resolve-merge-conflicts
My clone repository
storm
An LLM-powered knowledge curation system that researches a topic and generates a full-length report with citations.
strainge-paper
Analysis scripts and Jupyter notebooks accompanying the StrainGE paper
sui
Sui, a next-generation smart contract platform with high throughput, low latency, and an asset-oriented programming model powered by the Move programming language
test-site
site
WEVOTE
Taxonomic classification method of metagenomic reads