Beast code in Giters

Milan Malinsky's repositories

Fast calculation of Patterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species

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Tutorials on phylogenetic and phylogenomic inference

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A package for population structure inference from RAD-seq data

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A loose set of tools for (mainly evolutionary) genomics

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Genome assembly of highly heterozygous genomes using parents-offspring trios

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Build and integration- testing for FALCON

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Data and code for the manuscript "The genetics of niche-specific behavioral tendencies in an adaptive radiation of cichlid fishes"

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Estimating the sizes of coalescent genes ("c-genes") and single-topology tracts.

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Alignment-based Scrubbing pipeline

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A suite of tools for evolutionary genomics

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FALCON: experimental PacBio diploid assembler

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Estimating recombination maps from sperm Hi-C data

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de novo sequence assembler using string graphs

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