Mikkel Schubert's repositories
adapterremoval
AdapterRemoval v2 - rapid adapter trimming, identification, and read merging
big_text
Locate text or uncompressed files.
Language:RustMIT000
Bioprofile400_logger
Connect to Bioprofile400 and log the data to file
Language:PythonGPL-3.0000
crispy
CRISPyR, Cas9 target scoring program
Language:Rust000
Language:C++MIT000
disk_usage
Simple command to print disk usage stratified by user
Language:RustMIT000
mapDamage
mapDamage: tracking and quantifying damage patterns in ancient DNA sequences
Language:PythonMIT000
rust-bio
This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.
Language:RustMIT000
sickle
Windowed Adaptive Trimming for fastq files using quality
Language:CMIT000
typed-argparse
đź’ˇ write type-safe and elegant CLIs with a clear separation of concerns.
Language:PythonMIT000
zonkey
Reference panels for the Zonkey pipeline (paleomix)
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