Beast code in Giters

Mike Robeson's repositories

General procedure for making QIIME 2 compatible SILVA reference files

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Simple and crude scripts that I've written for my own work that may be of help to others with similar tasks

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A full-featured IQ-TREE 2 plugin for QIIME 2.

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REference Sequence annotation and CuRatIon Pipeline

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Database benchmarks using RESCRIPt

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Source repository for https://docs.qiime2.org

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This repository describes the methods used to test different sci-kit learn feature selection methods as part of Qiime2 q2-classifier.

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My fork of 'find_differential_primers'. Scripts to aid the design of differential primers for diagnostic PCR.

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My fork of 'PyCogent' : Official repository for software and unit tests

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QIIME 2 plugin for (meta)genome assembly.

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Phylogenetic reconstruction, and operations on phylogenetic trees.

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A QIIME 2 implementation of SMURF

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Qiime2 Sourmash Plugin

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Definitions of common QIIME 2 types.

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Quantitative Insights Into Microbial Ecology (QIIME): Official repository for software and unit tests

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