microsoft / CromwellOnAzure

Microsoft Genomics implementation of the Broad Institute's Cromwell workflow engine on Azure

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Create a long-running integration test in C# that is executable by Azure DevOps

MattMcL4475 opened this issue · comments

Problem:
The current mutect2 long-running workflow is written in bash, is not source-controlled, and is difficult to debug and develop in Azure DevOps.

Solution:
Re-write the entire mutect2 long-running workflow to start and wait all in C#.