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metageni / Scaffold_builder

Combining de novo and reference-guided assembly with Scaffold_builder

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out.delta when running in parallel

amandawarr opened this issue · comments

commented

Hello,

I'm finding scaffold_builder useful for a pipeline I am putting together (thanks!), but note that nucmer is not given the user defined prefix and briefly writes to out.delta before being passed to show-coords, which causes problems if multiple jobs are running at the same time from the same directory.