mehta-lab / microDL

3D virtual staining with 2D and 2.5D U-Nets

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Normalization statistics don't need to be stored with additional key

Christianfoley opened this issue · comments

Normalization statistics have been moved to their FOV or dataset attrs, and can be named under the channel name directly, without the additional "fov_statistics" or "dataset_statistics" key like in this data:
/local/scratch/groups/cmanalysis.grp/microDL_SP/Input/HEK_2022_03_15_Phase5e-4_Denconv_Nuc8e-4_Mem8e-4_pad15_bg50_32slicesHCS.zarr/plate/0/0/

Zattrs normalization:
Screen Shot 2023-04-11 at 4 11 38 PM

Fixed in #188