Unable to find Java in updated ImageJ

[hrdawson]

Dear Dr. Katabuchi,

I've found a small bug caused by a change in filepath in the most recent ImageJ. After receiving the "ImageJ not found" error, I discovered that more accurately, Java isn't found. Your code locates Java in "Contents/Resources/Java/ij.jar"; however, it now resides in "Contents/Java/ij.jar". My work around is to move the Java file into Resources which allows the code to run, although it still displays a hefty error message at the end:
Warning messages: 1: In if (imagej == "ImageJ not found") return("ImageJ not found") else path.imagej <- imagej : the condition has length > 1 and only the first element will be used 2: In if (file.exists(paste(path.imagej, "Contents/Resources/Java/ij.jar", : the condition has length > 1 and only the first element will be used 3: In if (temp.slash2 != "/") { : the condition has length > 1 and only the first element will be used

Thank you for writing and maintaining this code.

Best,
Hilary Rose Dawson

[Masatoshi Katabuchi]

Hi, thank you for reporting. It's updated in the dev version but not for the CARN version yet. I will upload it to CRAN soon.