mattiaspaul / realtimeDeeds

example code for TBME Publication "Model-based Sparse-to-dense Image Registration for Realtime Respiratory Motion Estimation in Image-guided Interventions"

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can not find './Data/volunteerA/dyn/deeds_bh/sl_ss9_tt1_displ.mat' file

tianyizheming opened this issue · comments

fieldsPath = ['./Data/',patString,'/dyn/deeds_bh/'];

Hello, your paper is attractive, and I am interested in it. Thank you for providing your code for learning.
But when I run the example.m, I can not find the displ.mat data. Could you share them?

commented

Hi, the dataset is not included.
You can download them from: https://zenodo.org/record/55345#.WvLINd8xBhF

I have issue that I can not find ./Data/volunteerA/dyn/deeds_bh/sl_ss9_tt1_displ.mat' on https://zenodo.org/record/55345#.WvLINd8xBhF and https://zenodo.org/record/55345#.W3pa87gxVPY. please suggest to find them. Could you share them?

commented

Sure, thank you for asking. I forgot to upload it. You can download it here. The read me file is also updated to include this link.

Thank you for helping.

I have found some issue on your code that shows error bellow :

Undefined function or variable 'vl_nnconv'.

Error in example (line 89)
gRefSum2 = vl_nnconv(gRefBlock.^2,gfilt,[]);

please suggest me to edit them.

Thanks.

For the 'vl_nnconv' function, you should download the MatconvNet toolbox according to the instructions from: http://www.vlfeat.org/matconvnet/