Riccardo Foffi's repositories
MicrobeAgents.jl
Agent-based modeling of microbial motile behavior via Agents.jl
Psi_StructuralIndicator.jl
Julia script to evaluate the structural indicator Ψ (defined in Foffi & Sciortino, J Phys Chem B 2022).
Autocorrelations.jl
Fast evaluation of autocorrelation functions
MeanSquaredDisplacement.jl
Evaluate MSD of timeseries
ParticleTracking.jl
Track moving particles with Julia, in two and three spatial dimensions
Agents.jl
Agent-based modeling framework in Julia
BioformatsLoader.jl
A julia package to load images using bioformats
BlobTracking.jl
Detect and track blobs in video
BubbleBath.jl
Generate loose packings of spheres in orthorhombic domains, in 2 and 3 dimensions.
hugo-bearcub
🐻 A lightweight Hugo theme based on Bear Blog and Hugo Bear Blog
dracula.nvim
Dracula colorscheme for neovim written in Lua
Hungarian.jl
The Hungarian(Kuhn-Munkres) algorithm for Julia
IfUSSD2022
Animations for IfU SSD 2022
IMinuit.jl
A Julia wrapper of iminuit. iminuit is a Python interface to the C++ version of the function minimization and error analysis package MINUIT.
IOUtils
Some useful I/O functions
Particles
Utility routines for particle-like data and integration with common molecular structure formats
PublicationFiguresMakie.jl
Makie theme with some publication-ready settings
rosepine-kitty
Soho vibes for kitty
SpatialStructure
Structural analysis of particle-like data
Surfaces
Simple models of bacterial transport
VMDTCL
Julia wrappers around TCL for VMD (http://www.ks.uiuc.edu/Research/vmd/)
WaterLily.jl
Fast and simple fluid simulator in Julia