Martin Kim's repositories
biocyc-extractor
Extracts chemicals and reactions from Biocyc database files.
CanSig
Discovering de novo shared transcriptional programs in single cancer cells
cell2location
Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)
cellxgene-census
CZ CELLxGENE Discover Census
fsdl-labs-2022
Complete deep learning project developed in Full Stack Deep Learning, 2022 edition. Generated automatically from https://github.com/full-stack-deep-learning/fsdl-text-recognizer-2022
martinkim0
Config files for my GitHub profile.
distill-template
This is the repository for the distill web framework
ecosystem-ci
Automate issue discovery for your projects against Lightning nightly and releases.
mrvi
Multi-resolution Variational Inference
mudata
Multimodal Data (.h5mu) implementation for Python
openproblems-v2
Formalizing and benchmarking open problems in single-cell genomics
pytorch
Tensors and Dynamic neural networks in Python with strong GPU acceleration
scanpy
Single-cell analysis in Python. Scales to >1M cells.
scgen
Single cell perturbation prediction
scib
Benchmarking analysis of data integration tools
scvelo
RNA Velocity generalized through dynamical modeling
scvi-tools
Deep probabilistic analysis of single-cell omics data
scvi-tools-feedstock
A conda-smithy repository for scvi-tools.