marcovzla / vqa

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vqa

coco on jenny

These are instructions to install the coco api in jenny. We assume you are using conda. The coco dataset is located at /data/nlp/corpora/COCO.

To install the coco api in jenny:

# create conda environment
conda create -n vqa python=2
source activate vqa
# install dependencies
conda install cython matplotlib ipython jupyter scikit-image
# clone coco api
git clone https://github.com/cocodataset/cocoapi
cd cocoapi
# create symlinks to dataset in jenny
ln -s /data/nlp/corpora/COCO/images images
ln -s /data/nlp/corpora/COCO/annotations/annotations annotations
# make python api
cd PythonAPI
make

Once everything has been installed, you can run jupyter notebook. Jupyter opens a browser by default, but we don't want that so we will use the --no-browser option.

jupyter notebook --no-browser

Jupyter will print something like this:

    Copy/paste this URL into your browser when you connect for the first time,
    to login with a token:
        http://localhost:8888/?token=3c0235703fa440de24b4b85d07346043a5d4be892472a2ee&token=3c0235703fa440de24b4b85d07346043a5d4be892472a2ee

This is the url that you will open in your local machine after opening an ssh tunnel to jenny. To open the ssh tunnel in your local machine:

ssh -N -f -L localhost:8888:localhost:8888 user@jenny

Now open the url in your local machine and use the notebook. Once you are done, find the process (in your local machine) and kill it:

$ ps aux | grep localhost:8888
marco     4947  0.0  0.0 168464  3588 ?        Ss   01:04   0:00 ssh -N -f -L localhost:8888:localhost:8888 jenny
marco     5276  0.0  0.0 119532  1048 pts/2    S+   01:13   0:00 grep --color=auto localhost:8888
$ kill -9 4947

yolov3 on jenny

git clone https://github.com/pjreddie/darknet
cd darknet
wget https://pjreddie.com/media/files/yolov3.weights
vim Makefile
# change first two lines to GPU=1 and CUDNN=1
make

Test things are working:

$ ./darknet detect cfg/yolov3.cfg yolov3.weights data/dog.jpg
layer     filters    size              input                output
    0 conv     32  3 x 3 / 1   416 x 416 x   3   ->   416 x 416 x  32  0.299 BFLOPs
    1 conv     64  3 x 3 / 2   416 x 416 x  32   ->   208 x 208 x  64  1.595 BFLOPs
    2 conv     32  1 x 1 / 1   208 x 208 x  64   ->   208 x 208 x  32  0.177 BFLOPs
    3 conv     64  3 x 3 / 1   208 x 208 x  32   ->   208 x 208 x  64  1.595 BFLOPs
    4 res    1                 208 x 208 x  64   ->   208 x 208 x  64
    5 conv    128  3 x 3 / 2   208 x 208 x  64   ->   104 x 104 x 128  1.595 BFLOPs
    6 conv     64  1 x 1 / 1   104 x 104 x 128   ->   104 x 104 x  64  0.177 BFLOPs
    7 conv    128  3 x 3 / 1   104 x 104 x  64   ->   104 x 104 x 128  1.595 BFLOPs
    8 res    5                 104 x 104 x 128   ->   104 x 104 x 128
    9 conv     64  1 x 1 / 1   104 x 104 x 128   ->   104 x 104 x  64  0.177 BFLOPs
   10 conv    128  3 x 3 / 1   104 x 104 x  64   ->   104 x 104 x 128  1.595 BFLOPs
   11 res    8                 104 x 104 x 128   ->   104 x 104 x 128
   12 conv    256  3 x 3 / 2   104 x 104 x 128   ->    52 x  52 x 256  1.595 BFLOPs
   13 conv    128  1 x 1 / 1    52 x  52 x 256   ->    52 x  52 x 128  0.177 BFLOPs
   14 conv    256  3 x 3 / 1    52 x  52 x 128   ->    52 x  52 x 256  1.595 BFLOPs
   15 res   12                  52 x  52 x 256   ->    52 x  52 x 256
   16 conv    128  1 x 1 / 1    52 x  52 x 256   ->    52 x  52 x 128  0.177 BFLOPs
   17 conv    256  3 x 3 / 1    52 x  52 x 128   ->    52 x  52 x 256  1.595 BFLOPs
   18 res   15                  52 x  52 x 256   ->    52 x  52 x 256
   19 conv    128  1 x 1 / 1    52 x  52 x 256   ->    52 x  52 x 128  0.177 BFLOPs
   20 conv    256  3 x 3 / 1    52 x  52 x 128   ->    52 x  52 x 256  1.595 BFLOPs
   21 res   18                  52 x  52 x 256   ->    52 x  52 x 256
   22 conv    128  1 x 1 / 1    52 x  52 x 256   ->    52 x  52 x 128  0.177 BFLOPs
   23 conv    256  3 x 3 / 1    52 x  52 x 128   ->    52 x  52 x 256  1.595 BFLOPs
   24 res   21                  52 x  52 x 256   ->    52 x  52 x 256
   25 conv    128  1 x 1 / 1    52 x  52 x 256   ->    52 x  52 x 128  0.177 BFLOPs
   26 conv    256  3 x 3 / 1    52 x  52 x 128   ->    52 x  52 x 256  1.595 BFLOPs
   27 res   24                  52 x  52 x 256   ->    52 x  52 x 256
   28 conv    128  1 x 1 / 1    52 x  52 x 256   ->    52 x  52 x 128  0.177 BFLOPs
   29 conv    256  3 x 3 / 1    52 x  52 x 128   ->    52 x  52 x 256  1.595 BFLOPs
   30 res   27                  52 x  52 x 256   ->    52 x  52 x 256
   31 conv    128  1 x 1 / 1    52 x  52 x 256   ->    52 x  52 x 128  0.177 BFLOPs
   32 conv    256  3 x 3 / 1    52 x  52 x 128   ->    52 x  52 x 256  1.595 BFLOPs
   33 res   30                  52 x  52 x 256   ->    52 x  52 x 256
   34 conv    128  1 x 1 / 1    52 x  52 x 256   ->    52 x  52 x 128  0.177 BFLOPs
   35 conv    256  3 x 3 / 1    52 x  52 x 128   ->    52 x  52 x 256  1.595 BFLOPs
   36 res   33                  52 x  52 x 256   ->    52 x  52 x 256
   37 conv    512  3 x 3 / 2    52 x  52 x 256   ->    26 x  26 x 512  1.595 BFLOPs
   38 conv    256  1 x 1 / 1    26 x  26 x 512   ->    26 x  26 x 256  0.177 BFLOPs
   39 conv    512  3 x 3 / 1    26 x  26 x 256   ->    26 x  26 x 512  1.595 BFLOPs
   40 res   37                  26 x  26 x 512   ->    26 x  26 x 512
   41 conv    256  1 x 1 / 1    26 x  26 x 512   ->    26 x  26 x 256  0.177 BFLOPs
   42 conv    512  3 x 3 / 1    26 x  26 x 256   ->    26 x  26 x 512  1.595 BFLOPs
   43 res   40                  26 x  26 x 512   ->    26 x  26 x 512
   44 conv    256  1 x 1 / 1    26 x  26 x 512   ->    26 x  26 x 256  0.177 BFLOPs
   45 conv    512  3 x 3 / 1    26 x  26 x 256   ->    26 x  26 x 512  1.595 BFLOPs
   46 res   43                  26 x  26 x 512   ->    26 x  26 x 512
   47 conv    256  1 x 1 / 1    26 x  26 x 512   ->    26 x  26 x 256  0.177 BFLOPs
   48 conv    512  3 x 3 / 1    26 x  26 x 256   ->    26 x  26 x 512  1.595 BFLOPs
   49 res   46                  26 x  26 x 512   ->    26 x  26 x 512
   50 conv    256  1 x 1 / 1    26 x  26 x 512   ->    26 x  26 x 256  0.177 BFLOPs
   51 conv    512  3 x 3 / 1    26 x  26 x 256   ->    26 x  26 x 512  1.595 BFLOPs
   52 res   49                  26 x  26 x 512   ->    26 x  26 x 512
   53 conv    256  1 x 1 / 1    26 x  26 x 512   ->    26 x  26 x 256  0.177 BFLOPs
   54 conv    512  3 x 3 / 1    26 x  26 x 256   ->    26 x  26 x 512  1.595 BFLOPs
   55 res   52                  26 x  26 x 512   ->    26 x  26 x 512
   56 conv    256  1 x 1 / 1    26 x  26 x 512   ->    26 x  26 x 256  0.177 BFLOPs
   57 conv    512  3 x 3 / 1    26 x  26 x 256   ->    26 x  26 x 512  1.595 BFLOPs
   58 res   55                  26 x  26 x 512   ->    26 x  26 x 512
   59 conv    256  1 x 1 / 1    26 x  26 x 512   ->    26 x  26 x 256  0.177 BFLOPs
   60 conv    512  3 x 3 / 1    26 x  26 x 256   ->    26 x  26 x 512  1.595 BFLOPs
   61 res   58                  26 x  26 x 512   ->    26 x  26 x 512
   62 conv   1024  3 x 3 / 2    26 x  26 x 512   ->    13 x  13 x1024  1.595 BFLOPs
   63 conv    512  1 x 1 / 1    13 x  13 x1024   ->    13 x  13 x 512  0.177 BFLOPs
   64 conv   1024  3 x 3 / 1    13 x  13 x 512   ->    13 x  13 x1024  1.595 BFLOPs
   65 res   62                  13 x  13 x1024   ->    13 x  13 x1024
   66 conv    512  1 x 1 / 1    13 x  13 x1024   ->    13 x  13 x 512  0.177 BFLOPs
   67 conv   1024  3 x 3 / 1    13 x  13 x 512   ->    13 x  13 x1024  1.595 BFLOPs
   68 res   65                  13 x  13 x1024   ->    13 x  13 x1024
   69 conv    512  1 x 1 / 1    13 x  13 x1024   ->    13 x  13 x 512  0.177 BFLOPs
   70 conv   1024  3 x 3 / 1    13 x  13 x 512   ->    13 x  13 x1024  1.595 BFLOPs
   71 res   68                  13 x  13 x1024   ->    13 x  13 x1024
   72 conv    512  1 x 1 / 1    13 x  13 x1024   ->    13 x  13 x 512  0.177 BFLOPs
   73 conv   1024  3 x 3 / 1    13 x  13 x 512   ->    13 x  13 x1024  1.595 BFLOPs
   74 res   71                  13 x  13 x1024   ->    13 x  13 x1024
   75 conv    512  1 x 1 / 1    13 x  13 x1024   ->    13 x  13 x 512  0.177 BFLOPs
   76 conv   1024  3 x 3 / 1    13 x  13 x 512   ->    13 x  13 x1024  1.595 BFLOPs
   77 conv    512  1 x 1 / 1    13 x  13 x1024   ->    13 x  13 x 512  0.177 BFLOPs
   78 conv   1024  3 x 3 / 1    13 x  13 x 512   ->    13 x  13 x1024  1.595 BFLOPs
   79 conv    512  1 x 1 / 1    13 x  13 x1024   ->    13 x  13 x 512  0.177 BFLOPs
   80 conv   1024  3 x 3 / 1    13 x  13 x 512   ->    13 x  13 x1024  1.595 BFLOPs
   81 conv    255  1 x 1 / 1    13 x  13 x1024   ->    13 x  13 x 255  0.088 BFLOPs
   82 yolo
   83 route  79
   84 conv    256  1 x 1 / 1    13 x  13 x 512   ->    13 x  13 x 256  0.044 BFLOPs
   85 upsample            2x    13 x  13 x 256   ->    26 x  26 x 256
   86 route  85 61
   87 conv    256  1 x 1 / 1    26 x  26 x 768   ->    26 x  26 x 256  0.266 BFLOPs
   88 conv    512  3 x 3 / 1    26 x  26 x 256   ->    26 x  26 x 512  1.595 BFLOPs
   89 conv    256  1 x 1 / 1    26 x  26 x 512   ->    26 x  26 x 256  0.177 BFLOPs
   90 conv    512  3 x 3 / 1    26 x  26 x 256   ->    26 x  26 x 512  1.595 BFLOPs
   91 conv    256  1 x 1 / 1    26 x  26 x 512   ->    26 x  26 x 256  0.177 BFLOPs
   92 conv    512  3 x 3 / 1    26 x  26 x 256   ->    26 x  26 x 512  1.595 BFLOPs
   93 conv    255  1 x 1 / 1    26 x  26 x 512   ->    26 x  26 x 255  0.177 BFLOPs
   94 yolo
   95 route  91
   96 conv    128  1 x 1 / 1    26 x  26 x 256   ->    26 x  26 x 128  0.044 BFLOPs
   97 upsample            2x    26 x  26 x 128   ->    52 x  52 x 128
   98 route  97 36
   99 conv    128  1 x 1 / 1    52 x  52 x 384   ->    52 x  52 x 128  0.266 BFLOPs
  100 conv    256  3 x 3 / 1    52 x  52 x 128   ->    52 x  52 x 256  1.595 BFLOPs
  101 conv    128  1 x 1 / 1    52 x  52 x 256   ->    52 x  52 x 128  0.177 BFLOPs
  102 conv    256  3 x 3 / 1    52 x  52 x 128   ->    52 x  52 x 256  1.595 BFLOPs
  103 conv    128  1 x 1 / 1    52 x  52 x 256   ->    52 x  52 x 128  0.177 BFLOPs
  104 conv    256  3 x 3 / 1    52 x  52 x 128   ->    52 x  52 x 256  1.595 BFLOPs
  105 conv    255  1 x 1 / 1    52 x  52 x 256   ->    52 x  52 x 255  0.353 BFLOPs
  106 yolo
Loading weights from yolov3.weights...Done!
data/dog.jpg: Predicted in 0.102587 seconds.
dog: 99%
truck: 92%
bicycle: 99%

Note the inference time. Inference should take less than a second on a GPU, and several seconds on a CPU.

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