marcopodda

fragment-based-dgm

Code for the paper "A Deep Generative Model for Fragment-Based Molecule Generation" (AISTATS 2020)

phd-thesis

PhD Thesis

grapher

graphgen-redux

GraphGen-Redux

mlutils

Utilities for ML experiments in pytorch

mol

go-node2vec

hsklearn

Hydra for scikit-learn

inn

Code for the paper: A machine learning approach to estimating preterm infants survival: development of the PISA predictor - Scientific Reports 8:13743 (2018).

bioinf-submission

Code for the article "A feature-agnostic machine learning framework to improve antigen discovery for bacterial pathogens" (submitted)

empty-project

A stub for deep learning projects

graph-loader

graphgen

GraphGen: A Scalable Approach to Domain-agnostic Labeled Graph Generation

LightGBM-with-Focal-Loss

An implementation of the focal loss to be used with LightGBM for binary and multi-class classification problems

marcopodda.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

ml-random-utils

Utilities I use in ML projects

ml_random_utils

Random utilities I use in ML projects.

mlconfig

Configuration classes that handle model selection and hold out hyper parameters

mltools

Utilities I use very often when training neural networks

petri-bio

pl-es-example